Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936146.1_cds_XP_016481784.1_73077
CDS Infomation

[gene=LOC107802742] [db_xref=GeneID:107802742] [protein=GTPase Der-like] [protein_id=XP_016481784.1] [location=join(37155..37521,38667..38734,39680..39763,39902..40195,40868..41007,41276..41363,42084..42263,44436..44597,44768..44961,46611..46761,47086..47251,47805..47875)] [gbkey=CDS]
Sequence

ATGGAGGTGAGTGCAGCAATATCTCTATCACGAACTCTCTCTCTACTCTCCCCAATTTCA
CTCACTTCTTCATCTATTCCATATCTTCCACCTCTCTCTCTCTCCCGCCGTTGCCACCTC
CGCCATCGCCGCTACACTCTTAGCCGGAGTTTTTCCCTTCCACCGGCCGTACCATTCTCC
AGTAGTAGTAGTAGTAGTAGTAGAGAAAATGAAGATGAAGAAGCGGAGTTGGTGGAAATT
GAAGACTCTGAATTAGAAGAAGAGTATGTTGAAGATGATGATAGCATTGATGTTGACTCA
CTGGAACGTGAAGCTGAACTTGTCGTTCGAGAGTTTTCGGATTCTTTGTCTCGACAATTG
ACTATAGATGAGGAGAGATCTAGTCCAAAAGAAGCACAAGTCAAGGAGAAGAGACGTAAT
AATACCTCAAAAAATATTCCTGATCATCTTCTTCCTAAGGTGGCGATTGTTGGAAGACCG
AACGTTGGTAAATCAGCACTATTCAATCGTCTTGTTGGGGGGAAGAAGGCCATTGTGGTA
GATGAACCCGGGGTAACAAGGGATCGCTTGTATGGTAGAGCATTTTGGGGAAACTATGAA
TTTGTGGTGGTGGATACAGGAGGTGTGCTTACCATTTCGAAATCACAGGCTGATTTAATG
GAAGAACTTGCTATCTCAACTACAATTGGAATGGAGGGCATTCCACTTGCTACCAGGGAG
GCTGCTGTTGCTAGAATGCCTTCAATGATTGAGAAACAAGCTACTGTGGCTGTTGAAGAG
TCATCTGTCATTATATTCCTTGTTGATGGCCAGGCAGGTCTAAATGCTGCTGATGTGGAA
ATAGCAGATTGGCTACGCAAGCACTACTCGGACAAATGTATTATTCTTGCTGTAAATAAG
TGTGAATCTCCACGCAAGGGAATCTCACAAGCATCAGAGTTTTGGTCTTTGGGGTTTGAT
CCCCTTCCAGTATCTGCTTTATCGGGAACTGGAACTGGAGAGCTTCTAGATCTTGTTTGC
TCAGGGATAAAGAAAGTTGAGGAGCCAGAATATCTTGAAGAAGAGAATTACGTTCCTGCA
ATCGCCATTGTTGGTCGTCCAAATGTTGGTAAAAGTAGTATTTTGAATGCTTTAGTTGGA
GAGGACAGAACAATTGTTAGTCCGGTTAGTGGAACGACTCGTGATGCTATTGATACAGAA
TTCACTGGATCAGATGGCCAGAAGTTTCGGCTTATTGATACTGCTGGAATAAGAAGAAAG
GCTGCAGTGGCTTCATCAGGTAGCATACCAGAGGCTTTATCTGTAAATCAAGCATTTCGC
GCGATTCGTCGGTCAGATGTTGTGGCTCTTGTTATTGAGGCTATGGCTTGCATCACTGAA
CAGGATTGCAAAATTGCAGAAAGGATAGAGAAAGAAGGGAAGGGTTGCCTCATTGTTGTG
AACAAGTGGGACACGATCCCTAACAAGAACCAAGAAACTACTGTGTTTTATGAGGAAGAT
GTTAGACGGAAGGTTCGTTCTTTGAGTTGGGCACCTATTGTGTATTCAACAGCAATAGCT
GGGCACAGTGTTGAAAAAATCATTGTTGCTGCTGCTGCGGTGGAAAAAGAGAGATCAAGA
AGATTGACTACTGCAATATTGAATCAAGTTGTGCGGGAAGCTGTTGCATTTAAAGCACCT
CCCAGGACTAGAGGTGGGAAGAGAGGACGTGTTTATTATAGCACTCAGGCAGCTATTCGA
CCACCAACATTTGTCTTCTTTGTTAACGATGCAAAGCTCTTTCCAGAGACATACCGTCGT
TACATGGAAAAGCAACTGAGGACGAGTGCAGGGTTTGCAGGCACACCAATTCGGCTTTTG
TGGCGCAGCAGGAGAAAAATGGAAAAGAATGATGGCAAGGATGGTCCAACAAAGATGCAA
GAGAACTTCAAAGACAGAGAGAAGAAGTTGGCAGTTCCAGCATGA

Peptide Sequence

PEP ID

XP_016481784.1
PEP Infomation

PREDICTED: GTPase Der-like [Nicotiana tabacum]
Sequence

MEVSAAISLSRTLSLLSPISLTSSSIPYLPPLSLSRRCHLRHRRYTLSRSFSLPPAVPFS
SSSSSSSRENEDEEAELVEIEDSELEEEYVEDDDSIDVDSLEREAELVVREFSDSLSRQL
TIDEERSSPKEAQVKEKRRNNTSKNIPDHLLPKVAIVGRPNVGKSALFNRLVGGKKAIVV
DEPGVTRDRLYGRAFWGNYEFVVVDTGGVLTISKSQADLMEELAISTTIGMEGIPLATRE
AAVARMPSMIEKQATVAVEESSVIIFLVDGQAGLNAADVEIADWLRKHYSDKCIILAVNK
CESPRKGISQASEFWSLGFDPLPVSALSGTGTGELLDLVCSGIKKVEEPEYLEEENYVPA
IAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTGSDGQKFRLIDTAGIRRK
AAVASSGSIPEALSVNQAFRAIRRSDVVALVIEAMACITEQDCKIAERIEKEGKGCLIVV
NKWDTIPNKNQETTVFYEEDVRRKVRSLSWAPIVYSTAIAGHSVEKIIVAAAAVEKERSR
RLTTAILNQVVREAVAFKAPPRTRGGKRGRVYYSTQAAIRPPTFVFFVNDAKLFPETYRR
YMEKQLRTSAGFAGTPIRLLWRSRRKMEKNDGKDGPTKMQENFKDREKKLAVPA

Transcript Sequence

Gene sequence data has not been registered.